[rkward-users] [rkward - Open Discussion] RE: Bug when using Annotations for illumina array

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By: tfry

RKWard has performance issues when dealing with datasets containing many (tens
of thousands) items (or sub-items, such as elements in a list/environment).
GO is one of those packages, and I guess lumiHumanV1 is another. Frankly, I'm
rather surprised, you don't see the issue directly when loading lumiHumanV1?

Unfortunately this is a problem of the current design and not easily solved,
though at least some partial progress has been made. If you were using a version
of RKWard prior to 0.4.8, upgrading to 0.4.8 will improve the situation somewhat
(but probably not enough to be useful).

There is a bug-tracker at https://sourceforge.net/tracker/?group_id=50231&atid=459007
. You can also write about such problems to the rkward-devel mailing list (prior
subscription recommended, as this makes spam control easier for us):
https://lists.sourceforge.net/lists/listinfo/rkward-devel .

Regards
Thomas

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