[rkward-cvs] SF.net SVN: rkward:[3668] branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted
tfry at users.sourceforge.net
tfry at users.sourceforge.net
Sat Jun 4 10:06:15 UTC 2011
Revision: 3668
http://rkward.svn.sourceforge.net/rkward/?rev=3668&view=rev
Author: tfry
Date: 2011-06-04 10:06:15 +0000 (Sat, 04 Jun 2011)
Log Message:
-----------
Figure placment according to JSS instructions. I also did some minor editing at some places, to achieve nicer page-breaks.
Modified Paths:
--------------
branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/GUI_elements.tex
branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/background.tex
branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/example_session.tex
Modified: branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/GUI_elements.tex
===================================================================
--- branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/GUI_elements.tex 2011-06-04 09:30:09 UTC (rev 3667)
+++ branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/GUI_elements.tex 2011-06-04 10:06:15 UTC (rev 3668)
@@ -19,7 +19,7 @@
visualization features (see Section~\ref{sec:analyzing_data}) for which \pkg{RKWard} provides a GUI
interface.
-\begin{figure}[h!]
+\begin{figure}[b!]
\centering
\includegraphics[width=15.450cm]{./figures/main_window.png}
\caption{Default \pkg{RKWard} main window after start up.
@@ -240,9 +240,9 @@
\caption{\pkg{RKWard} with several \code{data.frame}s in use at the same time. A)
One \code{data.frame} (\code{CO2} data of the \pkg{datasets} package) is opened for editing in the main window. Two further \code{data.frame}s
are opened in the background in tabs.
- B) Another \code{data.frame} (\code{ChickWeight} data of the \pkg{datasets} package) is opened as detached window.
+ B) Another \code{data.frame} (\code{ChickWeight}) is opened in a detached window.
C) \proglang{R}'s standard data editing features (e.\,g., \code{fix()}, \code{edit()})
- are also usable within an \pkg{RKWard} session. In this example \code{fix(DNase)}
+ are also usable in \pkg{RKWard}. In this example \code{fix(DNase)}
was invoked from the console (arrow).}
\label{fig:data_editors}
\end{figure}
@@ -328,7 +328,7 @@
it is required to specify a file before the dialog can proceed.
Further options are available from the tabbed pages of the central area.
-\begin{figure}[b!]
+\begin{figure}[t!]
\centering
\includegraphics[width=14.99cm]{./figures/CSV_import.png}
\caption{General data import dialog. Useful defaults for a variety of formats can
Modified: branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/background.tex
===================================================================
--- branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/background.tex 2011-06-04 09:30:09 UTC (rev 3667)
+++ branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/background.tex 2011-06-04 10:06:15 UTC (rev 3668)
@@ -76,7 +76,7 @@
made in the GUI. Most of the data handling functionality in \pkg{RKWard} is implemented as plugins
(see Section~\ref{sec:analyzing_data}), and many of these plugins have originated as user contributions.
Since version 0.5.5, \pkg{RKWard} also provides support for downloading user contributed ``plugin packs'',
-which are not included in the official \pkg{RKWard} releases. Technical details on the definition of plugins,
+which are not included in the official \pkg{RKWard} releases. Details on the definition of plugins,
and a commented example can be found in the technical supplement to this article.
\pkg{RKWard} is licensed under the terms of the GNU General Public License\footnote{\url{http://www.gnu.org/licenses/gpl.html}} Version 2
@@ -88,13 +88,7 @@
(\url{http://rkward.sourceforge.net/}). Selected key milestones of the development of \pkg{RKWard} are
visualized in Figure~\ref{fig:timeline}.
-In this paper we will give an overview over the installation process (Section~\ref{sec:installing_starting_RKWard}), the main GUI elements and
-features of \pkg{RKWard} (Section~\ref{sec:user_interface}), and closing by a short example
-of a simple \pkg{RKWard} session (Section~\ref{sec:using_RKWard}). For readers interested in the technical
-design, and reasons for certain design decisions, a technical supplement to this article
-is available.
-
-\begin{figure}[!h]
+\begin{figure}[b!]
\centering
\includegraphics[clip=true,trim=0cm 5.7cm 0cm 5.7cm,width=15.4cm]{./figures/timeline.pdf}
\caption{Timeline of important development milestones and changes in \pkg{RKWard}.
@@ -102,4 +96,10 @@
4.x versions of the \pkg{Qt} libraries, respectively and \pkg{KDE}4 refers to the
4.x version of the \pkg{KDE} libraries.}
\label{fig:timeline}
-\end{figure}
\ No newline at end of file
+\end{figure}
+
+In this paper we will give an overview over the installation process (Section~\ref{sec:installing_starting_RKWard}), the main GUI elements and
+features of \pkg{RKWard} (Section~\ref{sec:user_interface}), and closing by a short example
+of a simple \pkg{RKWard} session (Section~\ref{sec:using_RKWard}). For readers interested in the technical
+design, and reasons for certain design decisions, a technical supplement to this article
+is available.
Modified: branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/example_session.tex
===================================================================
--- branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/example_session.tex 2011-06-04 09:30:09 UTC (rev 3667)
+++ branches/jss_dec_10/FINAL_JSS_TEX/FINAL_splitted/example_session.tex 2011-06-04 10:06:15 UTC (rev 3668)
@@ -48,15 +48,14 @@
\proglang{R} object containing the table of imported data
are selected (Figure~\ref{fig:t_test}A).
Pressing the ``Submit'' button conducts the test, and opens the output document tab
-showing the results (Figure~\ref{fig:t_test}B).
+showing the results, including the date of analysis and relevant test parameters (Figure~\ref{fig:t_test}B).
\begin{figure}[b!]
\centering
\includegraphics[width=14cm]{./figures/t-test2.png}
\caption{A) Student's t-Test dialog for two variables. The bottom area shows the \proglang{R} code corresponding to the settings.
- B) Test results in tabular HTML format.
-Besides the result, information such as the date of analysis and the relevant test parameters are also reported.}
+ B) Test results in tabular HTML format. }
\label{fig:t_test}
\end{figure}
@@ -69,7 +68,7 @@
it is configured, and updates the window in real time on any changes to plot parameters.
The plot can also be exported to several image formats, directly from the preview window (Figure~\ref{fig:boxplot2}).
-\begin{figure}[t!]
+\begin{figure}[b!]
\centering
\includegraphics[width=15.4cm]{./figures/boxplot1.png}
\caption{Boxplot dialog. The first tab ``Variables'' is used to select the variables for analysis. It is possible to
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