[rkward-cvs] SF.net SVN: rkward:[3241] branches/jss_dec_10/FINAL_JSS_TEX/sources.bib
sjar at users.sourceforge.net
sjar at users.sourceforge.net
Thu Dec 16 00:57:59 UTC 2010
Revision: 3241
http://rkward.svn.sourceforge.net/rkward/?rev=3241&view=rev
Author: sjar
Date: 2010-12-16 00:57:59 +0000 (Thu, 16 Dec 2010)
Log Message:
-----------
* updated and added some references
Modified Paths:
--------------
branches/jss_dec_10/FINAL_JSS_TEX/sources.bib
Modified: branches/jss_dec_10/FINAL_JSS_TEX/sources.bib
===================================================================
--- branches/jss_dec_10/FINAL_JSS_TEX/sources.bib 2010-12-15 19:39:15 UTC (rev 3240)
+++ branches/jss_dec_10/FINAL_JSS_TEX/sources.bib 2010-12-16 00:57:59 UTC (rev 3241)
@@ -1,42 +1,54 @@
% This file was created with JabRef 2.6.
% Encoding: UTF8
- at ARTICLE{Ripley2005a,
- author = {Brian D. Ripley},
- title = {Internationalization Features of R 2.1.0},
- journal = {R News},
- year = {2005},
- pages = {2-7},
- number = {1},
- note = {ISSN 1609-3631},
+ at BOOK{RossiB2010,
+ title = {Download Patterns and Releases in Open Source Software Projects:
+ A Perfect Symbiosis?},
+ publisher = {Springer Boston},
+ year = {2010},
+ editor = {Springer Boston},
+ author = {B Rossi, B Russo and G Succi},
+ volume = {319/2010},
+ pages = {252-267},
+ comment = {ISSN 1868-4238, ISBN 978-3-642-13243-8},
+ doi = {10.1007/978-3-642-13244-5_20},
owner = {tux},
- timestamp = {2010.07.01},
- url = {http://CRAN.R-project.org/doc/Rnews/}
+ review = {Software usage by end-users is one of the factors used to evaluate
+ the success of software projects. In the context of open source software,
+ there is no single and non-controversial measure of usage, though.
+ Still, one of the most used and readily available measure is data
+ about projects downloads. Nevertheless, download counts and averages
+ do not convey as much information as the patterns in the original
+ downloads time series. In this research, we propose a method to increase
+ the expressiveness of mere download rates by considering download
+ patterns against software releases. We apply experimentally our method
+ to the most downloaded projects of SourceForge’s history crawled
+ through the FLOSSMole repository. Findings show that projects with
+ similar usage can have indeed different levels of sensitivity to
+ releases, revealing different behaviors of users. Future research
+ will develop further the pattern recognition approach to automatically
+ categorize open source projects according to their download patterns.},
+ timestamp = {2010.07.01}
}
- at ARTICLE{Eddelbuettel2003,
- author = {Dirk Eddelbuettel},
- title = {Quantian: A Scientific Computing Environment},
- journal = {Proceedings of DSC 2003},
- year = {2003},
- pages = {1-7},
- month = {March},
- comment = {ISSN 1609-395X},
+ at BOOK{BlanchetteSummerfield2008,
+ title = {C++ GUI Programming with Qt 4 (2nd Edition) (Prentice Hall Open Source
+ Software Development Series)},
+ publisher = {Prentice Hall},
+ year = {2008},
+ author = {Jasmin Blanchette and Mark Summerfield},
+ isbn = {0132354160},
owner = {tux},
- timestamp = {2010.07.01},
- url = {http://www.ci.tuwien.ac.at/Conferences/DSC-2003/}
+ timestamp = {2010.12.16},
+ url = {http://www.amazon.com/Programming-Prentice-Source-Software-Development/dp/0132354160%3FSubscriptionId%3D0JYN1NVW651KCA56C102%26tag%3Dtechkie-20%26linkCode%3Dxm2%26camp%3D2025%26creative%3D165953%26creativeASIN%3D0132354160}
}
- at INBOOK{Faure2000,
- title = {Creating and Using Components (KParts)},
- booktitle = {KDE 2.0 Development},
- editors = {David Sweet},
- publisher = {Sams},
- address = {Indianapolis, IN, USA},
- year = {2000},
- author = {David Faure},
+ at ARTICLE{CullmannND,
+ author = {Christoph Cullmann},
+ title = {KatePart},
owner = {tux},
- timestamp = {2010.12.12}
+ timestamp = {2010.12.15},
+ url = {http://kate-editor.org/about-katepart/}
}
@ARTICLE{Dalgaard2002,
@@ -65,74 +77,53 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
- at ARTICLE{Lecoutre2003,
- author = {E Lecoutre},
- title = {The R2HTML Package - Formatting HTML output on the fly or by using
- a template scheme},
- journal = {R News},
+ at ARTICLE{Eddelbuettel2003,
+ author = {Dirk Eddelbuettel},
+ title = {Quantian: A Scientific Computing Environment},
+ journal = {Proceedings of DSC 2003},
year = {2003},
- volume = {3},
- pages = {33-36},
- number = {3},
- comment = {ISSN 1609-3631},
+ pages = {1-7},
+ month = {March},
+ comment = {ISSN 1609-395X},
owner = {tux},
- timestamp = {2010.07.02}
+ timestamp = {2010.07.01},
+ url = {http://www.ci.tuwien.ac.at/Conferences/DSC-2003/}
}
- at ARTICLE{Ettrich2002,
- author = {Matthias Ettrich, Owen Taylor},
- title = {XEmbed Protocol Specification Version 0.5},
- year = {2002},
+ at INBOOK{Faure2000,
+ title = {Creating and Using Components (KParts)},
+ publisher = {Sams},
+ year = {2000},
+ author = {David Faure},
+ address = {Indianapolis, IN, USA},
+ booktitle = {KDE 2.0 Development},
+ editors = {David Sweet},
owner = {tux},
- timestamp = {2010.12.12},
- url = {http://standards.fr eedesktop.org/xembed-spec/xembed-spec-latest.html}
+ timestamp = {2010.12.12}
}
- at ARTICLE{CullmannND,
- author = {Christoph Cullmann},
- title = {KatePart},
- owner = {tux},
- timestamp = {2010.12.15},
- url = {http://kate-editor.org/about-katepart/}
-}
-
- at Manual{Plate2009,
- title = {trackObjs: Track Objects},
- author = {Tony Plate},
+ at ARTICLE{Fogel2009,
+ author = {K Fogel},
+ title = {Producing Open Source Software: How to Run a Successful Free Software
+ Project},
year = {2009},
- note = {R package version 0.8-6},
- url = {http://CRAN.R-project.org/package=trackObjs},
-}
-
- at ARTICLE{KWord,
- title = {KWord},
- timestamp = {2010.12.15},
- url = {http://www.koffice.org/kword/}
-}
-
- at ARTICLE{Leisch2002,
- author = {F Leisch},
- title = {Sweave: dynamic generation of statistical reports using literate
- data analysis},
- journal = {Proceedings in Computational Statistics},
- year = {2002},
- pages = {575–580},
- eid = {Physica Verlag, Heidelberg},
- abstract = {. (2002) Sweave: dynamic generation of statistical reports using literate
-
- data analysis. In Hardle,W. and Ronz,B. (eds.) Proceedings in Computational
- Statistics. Physica Verlag, Heidelberg, pp. 575–580.},
+ pages = {10-190},
owner = {tux},
timestamp = {2010.07.01}
}
- at ARTICLE{Young_2004,
- author = {F Young},
- title = {ViSta, the Visual Statistic System},
- year = {2004},
+ at ARTICLE{Fox2008,
+ author = {John Fox},
+ title = {Editorial},
+ journal = {R News},
+ year = {2008},
+ pages = {1-2},
+ number = {2},
+ month = {October},
+ note = {ISSN 1609-3631},
owner = {tux},
- timestamp = {2010.06.27},
- url = {http://www.visualstats.org}
+ timestamp = {2010.06.30},
+ url = {http://CRAN.R-project.org/doc/Rnews/}
}
@ARTICLE{Fox2007,
@@ -166,30 +157,73 @@
url = {http://www.jstatsoft.org/v14/i09}
}
- at ARTICLE{Fox2008,
- author = {John Fox},
- title = {Editorial},
- journal = {R News},
- year = {2008},
- pages = {1-2},
- number = {2},
- month = {October},
- note = {ISSN 1609-3631},
+ at MANUAL{Rcmdr2010,
+ title = {Rcmdr: R Commander},
+ author = {John Fox and with contributions from Liviu Andronic and Michael Ash
+ and Theophilius Boye and Stefano Calza and Andy Chang and Philippe
+ Grosjean and Richard Heiberger and G. Jay Kerns and Renaud Lancelot
+ and Matthieu Lesnoff and Uwe Ligges and Samir Messad and Martin Maechler
+ and Robert Muenchen and Duncan Murdoch and Erich Neuwirth and Dan
+ Putler and Brian Ripley and Miroslav Ristic and and Peter Wolf.},
+ year = {2010},
+ note = {R package version 1.6-2},
owner = {tux},
- timestamp = {2010.06.30},
- url = {http://CRAN.R-project.org/doc/Rnews/}
+ timestamp = {2010.12.16},
+ url = {http://CRAN.R-project.org/package=Rcmdr}
}
- at ARTICLE{Fogel2009,
- author = {K Fogel},
- title = {Producing Open Source Software: How to Run a Successful Free Software
- Project},
- year = {2009},
- pages = {10-190},
+ at ARTICLE{Friedrichsmeier2010,
+ author = {Thomas Friedrichsmeier},
+ title = {Introduction to Writing Plugins for RKWard},
+ year = {2010},
owner = {tux},
- timestamp = {2010.07.01}
+ timestamp = {2010.12.12},
+ url = {http://rkward.sourceforge.net/documents/devel/plugins/index.html}
}
+ at MISC{Hopkins2005,
+ author = {Don Hopkins},
+ title = {HyperTIES Hypermedia Browser and Emacs Authoring Tool for NeWS},
+ year = {2005},
+ owner = {tux},
+ timestamp = {2010.12.16},
+ url = {http://www.donhopkins.com/drupal/node/101}
+}
+
+ at ARTICLE{Ihaka_Gentlemen_1993,
+ author = {Ross Ihaka and Robert Gentleman},
+ title = {A Free Software Project - A Brief History},
+ year = {1998},
+ owner = {tux},
+ timestamp = {2010.06.27},
+ url = {http://cran.r-project.org/doc/html/interface98-paper/paper_2.html}
+}
+
+ at ARTICLE{KimLutteroth2010,
+ author = {James Kim and Christof Lutteroth},
+ title = {Multi-Platform Document-Oriented GUIs},
+ year = {2010},
+ abstract = {In recent years, increasing complexity of graphical user interfaces
+ (GUIs) of applications has led to problems in GUI management, since
+ there is no single layout to fulfill every user’s needs. GUI editors
+ have been developed to enhance end-user options but they commonly
+ fail to preserve personalized GUIs. This paper presents an extension
+ to the GUI editor built into the Auckland Layout Model (ALM) that
+ can permanently store user-defined GUI layouts and reproduce them
+ on different platforms. A novel technique called the document-oriented
+ approach has been exploited to empower end-user customization, which
+ allows GUI layouts to be dynamically edited, saved using a standardized
+ XML-based GUI description language, and loaded in a platform-independent
+ manner.},
+ institution = {CiteSeerX - Scientific Literature Digital Library and Search Engine
+ [http://citeseerx.ist.psu.edu/oai2] (United States)},
+ keywords = {GUI customization, platform-independent GUIs, ALM},
+ location = {http://www.scientificcommons.org/55322653},
+ owner = {tux},
+ timestamp = {2010.12.16},
+ url = {http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.154.8895}
+}
+
@ARTICLE{Kuhn2006,
author = {Max Kuhn},
title = {Sweave and the Open Document Format -- The {odfWeave} Package},
@@ -203,6 +237,36 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
+ at ARTICLE{Lecoutre2003,
+ author = {E Lecoutre},
+ title = {The R2HTML Package - Formatting HTML output on the fly or by using
+ a template scheme},
+ journal = {R News},
+ year = {2003},
+ volume = {3},
+ pages = {33-36},
+ number = {3},
+ comment = {ISSN 1609-3631},
+ owner = {tux},
+ timestamp = {2010.07.02}
+}
+
+ at ARTICLE{Leisch2002,
+ author = {F Leisch},
+ title = {Sweave: dynamic generation of statistical reports using literate
+ data analysis},
+ journal = {Proceedings in Computational Statistics},
+ year = {2002},
+ pages = {575–580},
+ eid = {Physica Verlag, Heidelberg},
+ abstract = {. (2002) Sweave: dynamic generation of statistical reports using literate
+
+ data analysis. In Hardle,W. and Ronz,B. (eds.) Proceedings in Computational
+ Statistics. Physica Verlag, Heidelberg, pp. 575–580.},
+ owner = {tux},
+ timestamp = {2010.07.01}
+}
+
@ARTICLE{Ligges2003,
author = {Uwe Ligges},
title = {{R} {H}elp {D}esk: {Package} Management},
@@ -216,6 +280,15 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
+ at ARTICLE{Ettrich2002,
+ author = {Matthias Ettrich, Owen Taylor},
+ title = {XEmbed Protocol Specification Version 0.5},
+ year = {2002},
+ owner = {tux},
+ timestamp = {2010.12.12},
+ url = {http://standards.fr eedesktop.org/xembed-spec/xembed-spec-latest.html}
+}
+
@ARTICLE{Murdoch2002,
author = {Duncan Murdoch},
title = {Reading Foreign Files},
@@ -229,6 +302,15 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
+ at MISC{MDN2010,
+ author = {Microsoft Developer Network},
+ title = {Microsoft Developer Network},
+ year = {2010},
+ owner = {tux},
+ timestamp = {2010.12.16},
+ url = {http://msdn2.microsoft.com/en-us/library/ms997505.aspx}
+}
+
@ARTICLE{Newton2007,
author = {Richard Newton and Lorenz Wernisch},
title = {{Rwui}: A Web Application to Create User Friendly Web Interfaces
@@ -243,15 +325,44 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
- at ARTICLE{Ihaka_Gentlemen_1993,
- author = {Ross Ihaka and Robert Gentleman},
- title = {A Free Software Project - A Brief History},
- year = {1998},
- owner = {tux},
- timestamp = {2010.06.27},
- url = {http://cran.r-project.org/doc/html/interface98-paper/paper_2.html}
+ at MANUAL{Plate2009,
+ title = {trackObjs: Track Objects},
+ author = {Tony Plate},
+ year = {2009},
+ note = {R package version 0.8-6},
+ url = {http://CRAN.R-project.org/package=trackObjs}
}
+ at MANUAL{RDCT2010,
+ title = {R: A Language and Environment for Statistical Computing},
+ author = {{R Development Core Team}},
+ organization = {R Foundation for Statistical Computing},
+ address = {Vienna, Austria},
+ year = {2010},
+ note = {{ISBN} 3-900051-07-0},
+ url = {http://www.R-project.org/}
+}
+
+ at MANUAL{RDCT2010a,
+ title = {Writing R Extensions},
+ author = {{R Development Core Team}},
+ organization = {R Foundation for Statistical Computing},
+ address = {Vienna, Austria},
+ year = {2010},
+ note = {{ISBN} 3-900051-11-9},
+ timestamp = {2010.10.15}
+}
+
+ at MANUAL{RDCT2010b,
+ title = {R Internals},
+ author = {{R Development Core Team}},
+ organization = {R Foundation for Statistical Computing},
+ address = {Vienna, Austria},
+ year = {2010},
+ note = {{ISBN} 3-900051-14-3},
+ timestamp = {2010.10.15}
+}
+
@BOOK{Schlittgen2009,
title = {Das Statistiklabor - R leicht gemacht},
publisher = {Springer},
@@ -264,33 +375,6 @@
url = {http://www.statistiklabor.de/}
}
- at ARTICLE{RaffelsbergerW2008,
- author = {W Raffelsberger,Y Krause,L Moulinier,D Kieffer,AL Morand, L Brino and O Poch},
- title = {RReportGenerator: automatic reports from routine statistical analysis
- using R},
- journal = {BIOINFORMATICS},
- year = {2008},
- volume = {24},
- pages = {276-278},
- number = {2},
- abstract = {Summary: With the establishment of high-throughput (HT) screening
- methods there is an increasing need for automatic analysis methods.
- Here we present RReportGenerator, a user-friendly portal for automatic
- routine analysis using the statistical platform R and Bioconductor.
- RReportGenerator is designed to analyze data using predefined analysis
- scenarios via a graphical user interface (GUI). A report in pdf format
- combining text, figures and tables is auto- matically generated and
- results may be exported. To demonstrate suitable analysis tasks we
- provide direct web access to a collection of analysis scenarios for
- summarizing data from transfected cell arrays (TCA), segmentation
- of CGH data, and microarray quality control and normalization. Availability:
- RReportGenerator, a user manual and a collection of analysis scenarios
- are available under a GNU public license on http://www-bio3d-igbmc.u-strasbg.fr/~wraff},
- doi = {Vol. 24 no. 2 2008, pages 276–278 doi:10.1093/bioinformatics/btm556},
- owner = {tux},
- timestamp = {2010.07.01}
-}
-
@ARTICLE{Ripley2005,
author = {Brian D. Ripley},
title = {Packages and their Management in {R} 2.1.0},
@@ -304,6 +388,19 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
+ at ARTICLE{Ripley2005a,
+ author = {Brian D. Ripley},
+ title = {Internationalization Features of R 2.1.0},
+ journal = {R News},
+ year = {2005},
+ pages = {2-7},
+ number = {1},
+ note = {ISSN 1609-3631},
+ owner = {tux},
+ timestamp = {2010.07.01},
+ url = {http://CRAN.R-project.org/doc/Rnews/}
+}
+
@ARTICLE{Ripley2004,
author = {Brian D. Ripley},
title = {Lazy Loading and Packages in {R} 2.0.0},
@@ -317,45 +414,16 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
- at BOOK{RossiB2010,
- title = {Download Patterns and Releases in Open Source Software Projects:
- A Perfect Symbiosis?},
- publisher = {Springer Boston},
+ at MANUAL{TeachingDemos2010,
+ title = {TeachingDemos: Demonstrations for teaching and learning},
+ author = {Greg Snow},
year = {2010},
- editor = {Springer Boston},
- author = {B Rossi, B Russo and G Succi},
- volume = {319/2010},
- pages = {252-267},
- comment = {ISSN 1868-4238, ISBN 978-3-642-13243-8},
- doi = {10.1007/978-3-642-13244-5_20},
+ note = {R package version 2.7},
owner = {tux},
- review = {Software usage by end-users is one of the factors used to evaluate
- the success of software projects. In the context of open source software,
- there is no single and non-controversial measure of usage, though.
- Still, one of the most used and readily available measure is data
- about projects downloads. Nevertheless, download counts and averages
- do not convey as much information as the patterns in the original
- downloads time series. In this research, we propose a method to increase
- the expressiveness of mere download rates by considering download
- patterns against software releases. We apply experimentally our method
- to the most downloaded projects of SourceForge’s history crawled
- through the FLOSSMole repository. Findings show that projects with
- similar usage can have indeed different levels of sensitivity to
- releases, revealing different behaviors of users. Future research
- will develop further the pattern recognition approach to automatically
- categorize open source projects according to their download patterns.},
- timestamp = {2010.07.01}
+ timestamp = {2010.12.16},
+ url = {http://CRAN.R-project.org/package=TeachingDemos}
}
- at ARTICLE{Friedrichsmeier2010,
- author = {Thomas Friedrichsmeier},
- title = {Introduction to Writing Plugins for RKWard},
- year = {2010},
- owner = {tux},
- timestamp = {2010.12.12},
- url = {http://rkward.sourceforge.net/documents/devel/plugins/index.html}
-}
-
@ARTICLE{RDCT2001,
author = {R Core Team},
title = {What is R?},
@@ -370,36 +438,6 @@
url = {http://cran.r-project.org/doc/Rnews/}
}
- at Manual{RDCT2010a,
- title = {Writing R Extensions},
- author = {{R Development Core Team}},
- organization = {R Foundation for Statistical Computing},
- address = {Vienna, Austria},
- year = {2010},
- note = {{ISBN} 3-900051-11-9},
- timestamp = {2010.10.15}
-}
-
- at Manual{RDCT2010b,
- title = {R Internals},
- author = {{R Development Core Team}},
- organization = {R Foundation for Statistical Computing},
- address = {Vienna, Austria},
- year = {2010},
- note = {{ISBN} 3-900051-14-3},
- timestamp = {2010.10.15}
-}
-
- at Manual{RDCT2010,
- title = {R: A Language and Environment for Statistical Computing},
- author = {{R Development Core Team}},
- organization = {R Foundation for Statistical Computing},
- address = {Vienna, Austria},
- year = {2010},
- note = {{ISBN} 3-900051-07-0},
- url = {http://www.R-project.org/},
-}
-
@MANUAL{RDCT2004,
title = {R Data Import/Export},
author = {R Development Core Team},
@@ -412,18 +450,43 @@
timestamp = {2010.07.02}
}
- at ARTICLE{Zhou2005,
- author = {Y Zhou and J Davis},
- title = {Open source software reliability model: an empirical approach},
- journal = {ACM},
- year = {2005},
- pages = {67-72},
- comment = {Open Source Application Spaces: Fifth Workshop on Open Source Software
- Engineering (5-WOSSE)},
+ at ARTICLE{RaffelsbergerW2008,
+ author = {W Raffelsberger,Y Krause,L Moulinier,D Kieffer,AL Morand, L Brino
+ and O Poch},
+ title = {RReportGenerator: automatic reports from routine statistical analysis
+ using R},
+ journal = {BIOINFORMATICS},
+ year = {2008},
+ volume = {24},
+ pages = {276-278},
+ number = {2},
+ abstract = {Summary: With the establishment of high-throughput (HT) screening
+ methods there is an increasing need for automatic analysis methods.
+ Here we present RReportGenerator, a user-friendly portal for automatic
+ routine analysis using the statistical platform R and Bioconductor.
+ RReportGenerator is designed to analyze data using predefined analysis
+ scenarios via a graphical user interface (GUI). A report in pdf format
+ combining text, figures and tables is auto- matically generated and
+ results may be exported. To demonstrate suitable analysis tasks we
+ provide direct web access to a collection of analysis scenarios for
+ summarizing data from transfected cell arrays (TCA), segmentation
+ of CGH data, and microarray quality control and normalization. Availability:
+ RReportGenerator, a user manual and a collection of analysis scenarios
+ are available under a GNU public license on http://www-bio3d-igbmc.u-strasbg.fr/~wraff},
+ doi = {Vol. 24 no. 2 2008, pages 276–278 doi:10.1093/bioinformatics/btm556},
owner = {tux},
timestamp = {2010.07.01}
}
+ at ARTICLE{Young_2004,
+ author = {F Young},
+ title = {ViSta, the Visual Statistic System},
+ year = {2004},
+ owner = {tux},
+ timestamp = {2010.06.27},
+ url = {http://www.visualstats.org}
+}
+
@ARTICLE{Zhang2004,
author = {Jianhua Zhang and Robert Gentleman},
title = {Tools for Interactively Exploring {R} Packages},
@@ -437,6 +500,24 @@
url = {http://CRAN.R-project.org/doc/Rnews/}
}
+ at ARTICLE{Zhou2005,
+ author = {Y Zhou and J Davis},
+ title = {Open source software reliability model: an empirical approach},
+ journal = {ACM},
+ year = {2005},
+ pages = {67-72},
+ comment = {Open Source Application Spaces: Fifth Workshop on Open Source Software
+ Engineering (5-WOSSE)},
+ owner = {tux},
+ timestamp = {2010.07.01}
+}
+
+ at ARTICLE{KWord,
+ title = {KWord},
+ timestamp = {2010.12.15},
+ url = {http://www.koffice.org/kword/}
+}
+
@comment{jabref-meta: selector_publisher:}
@comment{jabref-meta: selector_author:}
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