[rkward-cvs] SF.net SVN: rkward-code:[4671] branches/external_plugins/rk. MultidimensionalScaling

m-eik at users.sf.net m-eik at users.sf.net
Thu Apr 4 19:45:39 UTC 2013


Revision: 4671
          http://sourceforge.net/p/rkward/code/4671
Author:   m-eik
Date:     2013-04-04 19:45:37 +0000 (Thu, 04 Apr 2013)
Log Message:
-----------
debianizing the plugin and fixing the inclusion error

Modified Paths:
--------------
    branches/external_plugins/rk.MultidimensionalScaling/ChangeLog
    branches/external_plugins/rk.MultidimensionalScaling/DESCRIPTION
    branches/external_plugins/rk.MultidimensionalScaling/R/rk.MultidimensionalScaling-package.R
    branches/external_plugins/rk.MultidimensionalScaling/inst/CITATION
    branches/external_plugins/rk.MultidimensionalScaling/inst/NEWS.Rd
    branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.js
    branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.xml
    branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rk.MultidimensionalScaling.pluginmap
    branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rkwarddev_MDS_plugin_script.R
    branches/external_plugins/rk.MultidimensionalScaling/man/rk.MultidimensionalScaling-package.Rd

Added Paths:
-----------
    branches/external_plugins/rk.MultidimensionalScaling/debian/
    branches/external_plugins/rk.MultidimensionalScaling/debian/changelog
    branches/external_plugins/rk.MultidimensionalScaling/debian/compat
    branches/external_plugins/rk.MultidimensionalScaling/debian/control
    branches/external_plugins/rk.MultidimensionalScaling/debian/copyright
    branches/external_plugins/rk.MultidimensionalScaling/debian/rules
    branches/external_plugins/rk.MultidimensionalScaling/debian/source/
    branches/external_plugins/rk.MultidimensionalScaling/debian/source/format

Modified: branches/external_plugins/rk.MultidimensionalScaling/ChangeLog
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/ChangeLog	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/ChangeLog	2013-04-04 19:45:37 UTC (rev 4671)
@@ -1,5 +1,11 @@
 ChangeLog for package rk.MultidimensionalScaling
 
+changes in version 0.01-6 (2013-04-04)
+added:
+  - debianized the plugin
+fixed:
+  - removed erroneous pluginmap inclusions from XML files
+
 changes in version 0.01-5 (2013-02-24)
 changed:
   - updated rkwarddev generator script (compatibility with 0.06-2) and regenerated plugin code

Modified: branches/external_plugins/rk.MultidimensionalScaling/DESCRIPTION
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/DESCRIPTION	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/DESCRIPTION	2013-04-04 19:45:37 UTC (rev 4671)
@@ -1,8 +1,8 @@
 Package: rk.MultidimensionalScaling
 Type: Package
 Title: RKWard GUI for multidimensional scaling
-Version: 0.01-5
-Date: 2013-02-24
+Version: 0.01-6
+Date: 2013-04-04
 Author: Meik Michalke <meik.michalke at hhu.de>
 Maintainer: Meik Michalke <meik.michalke at hhu.de>
 Depends:

Modified: branches/external_plugins/rk.MultidimensionalScaling/R/rk.MultidimensionalScaling-package.R
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/R/rk.MultidimensionalScaling-package.R	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/R/rk.MultidimensionalScaling-package.R	2013-04-04 19:45:37 UTC (rev 4671)
@@ -3,8 +3,8 @@
 #' \tabular{ll}{
 #' Package: \tab rk.MultidimensionalScaling\cr
 #' Type: \tab Package\cr
-#' Version: \tab 0.01-5\cr
-#' Date: \tab 2013-02-24\cr
+#' Version: \tab 0.01-6\cr
+#' Date: \tab 2013-04-04\cr
 #' Depends: \tab  rkward (>= 0.5.6)\cr
 #' Enhances: \tab rkward\cr
 #' License: \tab GPL (>= 3)\cr

Added: branches/external_plugins/rk.MultidimensionalScaling/debian/changelog
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/debian/changelog	                        (rev 0)
+++ branches/external_plugins/rk.MultidimensionalScaling/debian/changelog	2013-04-04 19:45:37 UTC (rev 4671)
@@ -0,0 +1,6 @@
+r-other-rkward-rk-multidimensionalscaling (0.01-6-1) unstable; urgency=low
+
+  * new upstream release
+
+ -- m.eik michalke <meik.michalke at hhu.de>  Thu, 04 Apr 2013 21:28:28 +0000
+

Added: branches/external_plugins/rk.MultidimensionalScaling/debian/compat
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/debian/compat	                        (rev 0)
+++ branches/external_plugins/rk.MultidimensionalScaling/debian/compat	2013-04-04 19:45:37 UTC (rev 4671)
@@ -0,0 +1 @@
+7 

Added: branches/external_plugins/rk.MultidimensionalScaling/debian/control
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/debian/control	                        (rev 0)
+++ branches/external_plugins/rk.MultidimensionalScaling/debian/control	2013-04-04 19:45:37 UTC (rev 4671)
@@ -0,0 +1,14 @@
+Source: r-other-rkward-rk-multidimensionalscaling
+Section: math
+Priority: optional
+Maintainer: m.eik michalke <meik.michalke at hhu.de>
+Build-Depends-Indep: debhelper (>> 4.1.0), r-base-dev (>= 2.9.0), cdbs, rkward (>= 0.5.6)
+Standards-Version: 3.9.3.1
+Homepage: http://rkward.sf.net
+
+Package: r-other-rkward-rk-multidimensionalscaling
+Architecture: all
+Section: math
+Depends: r-base (>= 2.15.0), rkward (>= 0.5.6)
+Description: GNU R package: RKWard GUI for multidimensional scaling
+Homepage: http://rkward.sf.net

Added: branches/external_plugins/rk.MultidimensionalScaling/debian/copyright
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/debian/copyright	                        (rev 0)
+++ branches/external_plugins/rk.MultidimensionalScaling/debian/copyright	2013-04-04 19:45:37 UTC (rev 4671)
@@ -0,0 +1,18 @@
+The R library rk.MultidimensionalScaling was originally  written and is maintained by Meik Michalke <meik.michalke at hhu.de>.
+
+This Debian package was put together m.eik michalke <meik.michalke at hhu.de>.
+
+The package was renamed from its upstream name 'rk.MultidimensionalScaling' to
+'r-other-rkward-rk-multidimensionalscaling' in harmony with the R packaging policy to indicate
+that the package is external to the CRAN or BioC repositories.
+
+rk.MultidimensionalScaling Copyright (C) 2013 Meik Michalke, released under the
+GNU General Public License (GPL) version 3 or (at your option) any later version.
+
+This software is distributed in the hope that it will be useful, but
+WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
+or FITNESS FOR A PARTICULAR PURPOSE.
+
+You should have received a copy of the license with your Debian system,
+in the file /usr/share/common-licenses/GPL-3, or with the
+source package as the file COPYING or LICENSE.

Added: branches/external_plugins/rk.MultidimensionalScaling/debian/rules
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/debian/rules	                        (rev 0)
+++ branches/external_plugins/rk.MultidimensionalScaling/debian/rules	2013-04-04 19:45:37 UTC (rev 4671)
@@ -0,0 +1,12 @@
+#!/usr/bin/make -f
+#								-*- makefile -*-
+# debian/rules file for the Debian/GNU Linux r-other-rkward-rk-multidimensionalscaling package
+# Copyright 2013 by m.eik michalke <meik.michalke at hhu.de>
+
+debRreposname := other-rkward
+
+include /usr/share/R/debian/r-cran.mk
+
+# Require a number equal or superior than the R version the package was built with.
+install/$(package)::
+	echo "R:Depends=r-base-core (>= $(shell R --version | head -n1 | perl -ne 'print / +([0-9]\.[0-9]+\.[0-9])/')~)" >> debian/$(package).substvars


Property changes on: branches/external_plugins/rk.MultidimensionalScaling/debian/rules
___________________________________________________________________
Added: svn:executable
## -0,0 +1 ##
+*
\ No newline at end of property
Added: branches/external_plugins/rk.MultidimensionalScaling/debian/source/format
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/debian/source/format	                        (rev 0)
+++ branches/external_plugins/rk.MultidimensionalScaling/debian/source/format	2013-04-04 19:45:37 UTC (rev 4671)
@@ -0,0 +1 @@
+3.0 (quilt)

Modified: branches/external_plugins/rk.MultidimensionalScaling/inst/CITATION
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/inst/CITATION	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/inst/CITATION	2013-04-04 19:45:37 UTC (rev 4671)
@@ -2,12 +2,12 @@
 		title="rk.MultidimensionalScaling: RKWard GUI for multidimensional scaling",
 		author="Meik Michalke",
 		year="2013",
-		note="(Version 0.01-5)",
+		note="(Version 0.01-6)",
 		url="http://rkward.sf.net",
 
 		textVersion =
 		paste("Michalke, M. (2013). ",
-				"rk.MultidimensionalScaling: RKWard GUI for multidimensional scaling (Version 0.01-5). ",
+				"rk.MultidimensionalScaling: RKWard GUI for multidimensional scaling (Version 0.01-6). ",
 				"Available from http://rkward.sf.net",
 				sep=""),
 

Modified: branches/external_plugins/rk.MultidimensionalScaling/inst/NEWS.Rd
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/inst/NEWS.Rd	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/inst/NEWS.Rd	2013-04-04 19:45:37 UTC (rev 4671)
@@ -1,5 +1,17 @@
 \name{NEWS}
 \title{News for Package 'rk.MultidimensionalScaling'}
+\section{Changes in rk.MultidimensionalScaling version 0.01-6 (2013-04-04)}{
+  \subsection{added}{
+    \itemize{
+      \item debianized the plugin
+    }
+  }
+  \subsection{fixed}{
+    \itemize{
+      \item removed erroneous pluginmap inclusions from XML files
+    }
+  }
+}
 \section{Changes in rk.MultidimensionalScaling version 0.01-5 (2013-02-24)}{
   \subsection{changed}{
     \itemize{

Modified: branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.js
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.js	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.js	2013-04-04 19:45:37 UTC (rev 4671)
@@ -2,7 +2,7 @@
 //perhaps don't make changes here, but in the rkwarddev script instead!
 
 // define variables globally
-var frmUsnlysbsChecked = getValue("frm_Usnlysbs.checked");
+ var frmUsnlysbsChecked = getValue("frm_Usnlysbs.checked");
 var vrslSlctdvrbShortname = getValue("vrsl_Slctdvrb.shortname").split("\n").join("\", \"");
 var frmDtprprtnEnabled = getValue("frm_Dtprprtn.enabled");
 

Modified: branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.xml
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.xml	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/plugins/Multidimensionalscaling.xml	2013-04-04 19:45:37 UTC (rev 4671)
@@ -4,7 +4,6 @@
 			perhaps don't make changes here, but in the rkwarddev script instead! -->
 	<code file="Multidimensionalscaling.js" />
 	<help file="Multidimensionalscaling.rkh" />
-	<include file="../rk.MultidimensionalScaling.pluginmap" />
 	<logic>
 		<connect governor="current_object" client="vrsl_Dtdtfrmm.available" />
 		<connect governor="vrsl_Dtdtfrmm.available" client="vrs_Selectdt.root" />

Modified: branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rk.MultidimensionalScaling.pluginmap
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rk.MultidimensionalScaling.pluginmap	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rk.MultidimensionalScaling.pluginmap	2013-04-04 19:45:37 UTC (rev 4671)
@@ -15,8 +15,8 @@
 		name="rk.MultidimensionalScaling"
 		shortinfo="RKWard GUI for multidimensional scaling"
 		longinfo="RKWard GUI for multidimensional scaling"
-		version="0.01-5"
-		releasedate="2013-02-24"
+		version="0.01-6"
+		releasedate="2013-04-04"
 		url="http://rkward.sf.net"
 		license="GPL (>= 3)"
 	>
@@ -27,11 +27,6 @@
 			role="aut, cre"
 		 />
 	</about>
-	<!-- 
-		<require 
-				file="path/file.pluginmap"
-			 /> 
-	-->
 	<components>
 		<component 
 			id="cmp_MltdmnsnlsclngMltdmnsnlsc"
@@ -49,12 +44,4 @@
 			<entry component="cmp_MltdmnsnlsclngMltdmnsnlsc" />
 		</menu>
 	</hierarchy>
-	<!-- 
-		<context id="x11">
-			</context> 
-	-->
-	<!-- 
-		<context id="import">
-			</context> 
-	-->
 </document>

Modified: branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rkwarddev_MDS_plugin_script.R
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rkwarddev_MDS_plugin_script.R	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/inst/rkward/rkwarddev_MDS_plugin_script.R	2013-04-04 19:45:37 UTC (rev 4671)
@@ -18,7 +18,7 @@
 		person(given="Meik", family="Michalke",
 			email="meik.michalke at hhu.de", role=c("aut","cre"))),
 	about=list(desc="RKWard GUI for multidimensional scaling",
-		version="0.01-5", url="http://rkward.sf.net")
+		version="0.01-6", url="http://rkward.sf.net")
 	)
 dependencies.info <- rk.XML.dependencies(
 	dependencies=list(rkward.min=ifelse(isTRUE(guess.getter), "0.6.0", "0.5.6")),

Modified: branches/external_plugins/rk.MultidimensionalScaling/man/rk.MultidimensionalScaling-package.Rd
===================================================================
--- branches/external_plugins/rk.MultidimensionalScaling/man/rk.MultidimensionalScaling-package.Rd	2013-04-04 19:44:59 UTC (rev 4670)
+++ branches/external_plugins/rk.MultidimensionalScaling/man/rk.MultidimensionalScaling-package.Rd	2013-04-04 19:45:37 UTC (rev 4671)
@@ -8,8 +8,8 @@
 }
 \details{
   \tabular{ll}{ Package: \tab rk.MultidimensionalScaling\cr
-  Type: \tab Package\cr Version: \tab 0.01-5\cr Date: \tab
-  2013-02-24\cr Depends: \tab rkward (>= 0.5.6)\cr
+  Type: \tab Package\cr Version: \tab 0.01-6\cr Date: \tab
+  2013-04-04\cr Depends: \tab rkward (>= 0.5.6)\cr
   Enhances: \tab rkward\cr License: \tab GPL (>= 3)\cr
   LazyLoad: \tab yes\cr URL: \tab http://rkward.sf.net\cr }
 





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