[kde-freebsd] Akonadi Server crashes upon start-up

[Jerry]

On Sat, 15 May 2010 14:05:31 +1200
Shane Bell <decept0 at gmail.com> articulated:

> Removing ~/.local/share/akonadi & ~/.config/akonadi fixed it for me.

I tried that; however, it also failed to alleviate the problem. This
is now the output of the saved error filed created when the server
failed to start:

Akonadi Server Self-Test Report
===============================

Test 1:  SUCCESS
--------

Database driver found.
Details: The QtSQL driver 'QMYSQL' is required by your current Akonadi server configuration and was found on your system.

File content of '/home/gerard/.config/akonadi/akonadiserverrc':
[%General]
Driver=QMYSQL
SizeThreshold=4096
ExternalPayload=false

[QMYSQL]
Name=akonadi
Host=
User=
Password=
Options="UNIX_SOCKET=/home/gerard/.local/share/akonadi/db_misc/mysql.socket"
ServerPath=/usr/local/bin/mysqld_safe
StartServer=true


Test 2:  SUCCESS
--------

MySQL server found.
Details: You currently have configured Akonadi to use the MySQL server '/usr/local/bin/mysqld_safe'.
Make sure you have the MySQL server installed, set the correct path and ensure you have the necessary read and execution rights on the server executable. The server executable is typically called 'mysqld', its locations varies depending on the distribution.

Test 3:  SUCCESS
--------

MySQL server is executable.
Details: MySQL server found: cat: /var/db/mysql/scorpio.seibercom.net.pid: Permission denied
rm: /var/db/mysql/scorpio.seibercom.net.pid: Permission denied
100515 07:27:30 mysqld_safe Fatal error: Can't remove the pid file:
/var/db/mysql/scorpio.seibercom.net.pid
Please remove it manually and start /usr/local/bin/mysqld_safe again;
mysqld daemon not started
/usr/local/bin/mysqld_safe: cannot create /var/db/mysql/scorpio.seibercom.net.err: Permission denied
100515 07:27:30 mysqld_safe Logging to '/var/db/mysql/scorpio.seibercom.net.err'.


Test 4:  ERROR
--------

MySQL server log contains errors.
Details: The MySQL server error log file &apos;<a href='/home/gerard/.local/share/akonadi/db_data/mysql.err'>/home/gerard/.local/share/akonadi/db_data/mysql.err</a>&apos; contains errors.

File content of '/home/gerard/.local/share/akonadi/db_data/mysql.err':
100515 07:27:20 mysqld_safe Starting mysqld daemon with databases from /home/gerard/.local/share/akonadi/db_data/
100515  7:27:20 [Note] Buffered information: Performance schema disabled (reason: start parameters).

100515  7:27:20 [Note] Plugin 'FEDERATED' is disabled.
InnoDB: The InnoDB memory heap is disabled
InnoDB: Mutexes and rw_locks use GCC atomic builtins
InnoDB: Compressed tables use zlib 1.2.3
InnoDB: The first specified data file ./ibdata1 did not exist:
InnoDB: a new database to be created!
100515  7:27:20  InnoDB: Setting file ./ibdata1 size to 10 MB
InnoDB: Database physically writes the file full: wait...
100515  7:27:20  InnoDB: Log file ./ib_logfile0 did not exist: new to be created
InnoDB: Setting log file ./ib_logfile0 size to 64 MB
InnoDB: Database physically writes the file full: wait...
100515  7:27:22  InnoDB: Log file ./ib_logfile1 did not exist: new to be created
InnoDB: Setting log file ./ib_logfile1 size to 64 MB
InnoDB: Database physically writes the file full: wait...
InnoDB: Doublewrite buffer not found: creating new
InnoDB: Doublewrite buffer created
InnoDB: 127 rollback segment(s) active.
InnoDB: Creating foreign key constraint system tables
InnoDB: Foreign key constraint system tables created
100515  7:27:24 InnoDB 1.1.0 started; log sequence number 0
100515  7:27:24 [Warning] Can't open and lock time zone table: Table 'mysql.time_zone_leap_second' doesn't exist trying to live without them
100515  7:27:24 [ERROR] Can't open and lock privilege tables: Table 'mysql.servers' doesn't exist
100515  7:27:24 [Note] /usr/local/libexec/mysqld: ready for connections.
Version: '5.5.4-m3-log'  socket: '/home/gerard/.local/share/akonadi/db_misc/mysql.socket'  port: 0  FreeBSD port: mysql-server-5.5.4


Test 5:  SUCCESS
--------

MySQL server default configuration found.
Details: The default configuration for the MySQL server was found and is readable at <a href='/usr/local/kde4/share/config/akonadi/mysql-global.conf'>/usr/local/kde4/share/config/akonadi/mysql-global.conf</a>.

File content of '/usr/local/kde4/share/config/akonadi/mysql-global.conf':
#
# Global Akonadi MySQL server settings,
# These settings can be adjusted using $HOME/.config/akonadi/mysql-local.conf
#
# Based on advice by Kris Köhntopp <kris at mysql.com>
#
[mysqld]
skip_grant_tables
skip_networking

# strict query parsing/interpretation
# TODO: make Akonadi work with those settings enabled
#sql_mode=strict_trans_tables,strict_all_tables,strict_error_for_division_by_zero,no_auto_create_user,no_auto_value_on_zero,no_engine_substitution,no_zero_date,no_zero_in_date,only_full_group_by,pipes_as_concat
#sql_mode=strict_trans_tables

# use InnoDB for transactions and better crash recovery
default_storage_engine=innodb
# case-insensitive table names, avoids trouble on windows
lower_case_table_names=1
character_set_server=latin1
collation_server=latin1_general_ci
table_cache=200
thread_cache_size=3
log_bin=mysql-bin
expire_logs_days=3
#sync_bin_log=0
# error log file name, relative to datadir
log_error=mysql.err
log_warnings=2
# log all queries, useful for debugging but generates an enormous amount of data
#log=mysql.full
# log queries slower than n seconds, log file name relative to datadir (for debugging only)
#log_slow_queries=mysql.slow
#long_query_time=1
# log queries not using indices, debug only, disable for production use
#log_queries_not_using_indexes=1
# maximum blob size
max_allowed_packet=32M
max_connections=256
# makes sense when having the same query multiple times
# makes no sense with prepared statements and/or transactions
query_cache_type=0
query_cache_size=0

innodb_file_per_table=1
innodb_log_buffer_size=1M
innodb_additional_mem_pool_size=1M
# messure database size and adjust
# SELECT sum(data_length) as bla, sum(index_length) as blub FROM information_schema.tables WHERE table_schema not in ("mysql", "information_schema");
innodb_buffer_pool_size=80M
# size of average write burst, keep Innob_log_waits small, keep Innodb_buffer_pool_wait_free small (see show global status like "inno%", show global variables)
innodb_log_file_size=64M
innodb_flush_log_at_trx_commit=2



Test 6:  SKIP
--------

MySQL server custom configuration not available.
Details: The custom configuration for the MySQL server was not found but is optional.

Test 7:  SUCCESS
--------

MySQL server configuration is usable.
Details: The MySQL server configuration was found at <a href='/home/gerard/.local/share/akonadi/mysql.conf'>/home/gerard/.local/share/akonadi/mysql.conf</a> and is readable.

File content of '/home/gerard/.local/share/akonadi/mysql.conf':
#
# Global Akonadi MySQL server settings,
# These settings can be adjusted using $HOME/.config/akonadi/mysql-local.conf
#
# Based on advice by Kris Köhntopp <kris at mysql.com>
#
[mysqld]
skip_grant_tables
skip_networking

# strict query parsing/interpretation
# TODO: make Akonadi work with those settings enabled
#sql_mode=strict_trans_tables,strict_all_tables,strict_error_for_division_by_zero,no_auto_create_user,no_auto_value_on_zero,no_engine_substitution,no_zero_date,no_zero_in_date,only_full_group_by,pipes_as_concat
#sql_mode=strict_trans_tables

# use InnoDB for transactions and better crash recovery
default_storage_engine=innodb
# case-insensitive table names, avoids trouble on windows
lower_case_table_names=1
character_set_server=latin1
collation_server=latin1_general_ci
table_cache=200
thread_cache_size=3
log_bin=mysql-bin
expire_logs_days=3
#sync_bin_log=0
# error log file name, relative to datadir
log_error=mysql.err
log_warnings=2
# log all queries, useful for debugging but generates an enormous amount of data
#log=mysql.full
# log queries slower than n seconds, log file name relative to datadir (for debugging only)
#log_slow_queries=mysql.slow
#long_query_time=1
# log queries not using indices, debug only, disable for production use
#log_queries_not_using_indexes=1
# maximum blob size
max_allowed_packet=32M
max_connections=256
# makes sense when having the same query multiple times
# makes no sense with prepared statements and/or transactions
query_cache_type=0
query_cache_size=0

innodb_file_per_table=1
innodb_log_buffer_size=1M
innodb_additional_mem_pool_size=1M
# messure database size and adjust
# SELECT sum(data_length) as bla, sum(index_length) as blub FROM information_schema.tables WHERE table_schema not in ("mysql", "information_schema");
innodb_buffer_pool_size=80M
# size of average write burst, keep Innob_log_waits small, keep Innodb_buffer_pool_wait_free small (see show global status like "inno%", show global variables)
innodb_log_file_size=64M
innodb_flush_log_at_trx_commit=2



Test 8:  SUCCESS
--------

akonadictl found and usable
Details: The program '/usr/local/kde4/bin/akonadictl' to control the Akonadi server was found and could be executed successfully.
Result:
Akonadi 1.3.1


Test 9:  ERROR
--------

Akonadi control process not registered at D-Bus.
Details: The Akonadi control process is not registered at D-Bus which typically means it was not started or encountered a fatal error during startup.

Test 10:  ERROR
--------

Akonadi server process not registered at D-Bus.
Details: The Akonadi server process is not registered at D-Bus which typically means it was not started or encountered a fatal error during startup.

Test 11:  SUCCESS
--------

Nepomuk search service registered at D-Bus.
Details: The Nepomuk search service is registered at D-Bus which typically indicates it is operational.

Test 12:  SUCCESS
--------

Nepomuk search service uses an appropriate backend. 
Details: The Nepomuk search service uses one of the recommended backends.

Test 13:  SKIP
--------

Protocol version check not possible.
Details: Without a connection to the server it is not possible to check if the protocol version meets the requirements.

Test 14:  ERROR
--------

No resource agents found.
Details: No resource agents have been found, Akonadi is not usable without at least one. This usually means that no resource agents are installed or that there is a setup problem. The following paths have been searched: '/usr/local/kde4/share/akonadi/agents'. The XDG_DATA_DIRS environment variable is set to '/usr/local/kde4/share::/usr/share:/usr/local/share:/usr/local/share/gnome', make sure this includes all paths where Akonadi agents are installed to.

Directory listing of '/usr/local/kde4/share/akonadi/agents':
birthdaysresource.desktop
contactsresource.desktop
icalresource.desktop
imapresource.desktop
kabcresource.desktop
kcalresource.desktop
knutresource.desktop
kolabproxyresource.desktop
localbookmarksresource.desktop
maildirresource.desktop
maildispatcheragent.desktop
mboxresource.desktop
microblog.desktop
mtdummyresource.desktop
nepomukcalendarfeeder.desktop
nepomukcontactfeeder.desktop
nepomuktagresource.desktop
nntpresource.desktop
notesresource.desktop
pop3resource.desktop
vcarddirresource.desktop
vcardresource.desktop

Environment variable XDG_DATA_DIRS is set to '/usr/local/kde4/share::/usr/share:/usr/local/share:/usr/local/share/gnome'

Test 15:  SUCCESS
--------

No current Akonadi server error log found.
Details: The Akonadi server did not report any errors during its current startup.

Test 16:  SUCCESS
--------

No previous Akonadi server error log found.
Details: The Akonadi server did not report any errors during its previous startup.

Test 17:  SUCCESS
--------

No current Akonadi control error log found.
Details: The Akonadi control process did not report any errors during its current startup.

Test 18:  SUCCESS
--------

No previous Akonadi control error log found.
Details: The Akonadi control process did not report any errors during its previous startup.


-- 
Jerry
KDE-FreeBSD.user at seibercom.net

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