help required to compile keedu-4.4.2
lux-integ
lux-integ at btconnect.com
Tue Apr 27 18:42:10 CEST 2010
On Tuesday 27 April 2010 10:57:55 am Andreas Pakulat wrote:
> On 27.04.10 10:52:28, David Faure wrote:
> > On Tuesday 27 April 2010, lux-integ wrote:
> > > cd $SOURCES/kdeedu-4.4.2/build/cantor/src/backends/R/rserver
> > > && --slave
> > > --file=$SOURCES/kdeedu-4.4.2/cantor/src/backends/R/rserver/tools/autolo
> > >ads.r
> > > $SOURCES/kdeedu-4.4.2/build/cantor/src/backends/R/rserver/rautoloads.h
> >
> > The name of the binary is missing before --slave.
> >
> > add_custom_target(renvvars COMMAND ${R_EXECUTABLE} --slave --
> > file=${CMAKE_CURRENT_SOURCE_DIR}/tools/envvars.r >
> > ${CMAKE_CURRENT_BINARY_DIR}/renvvars.h )
> >
> > So basically the problem is that R_EXECUTABLE is empty.
> >
> > ./modules/FindR.cmake:11:FIND_PROGRAM(R_EXECUTABLE R)
> > ./modules/FindR.cmake:13:IF(R_EXECUTABLE-NOTFOUND)
> > ./modules/FindR.cmake:15:ENDIF(R_EXECUTABLE-NOTFOUND)
> >
> > No abort on error when not found?
>
> Apart from that, the if-check should rather use if(NOT R_EXECUTABLE) as
> that doesn't rely on "cmake internals".
>
> Andreas
I hope the FindR.cmake script I am using 'finds' all the relevant
R-executable programs. Here is a snippet of the script I use:
FIND_PROGRAM(R_EXE_FILE R ${PATH})
FIND_PROGRAM(R_Rscript_EXE_FILE Rscript ${PATH})
FIND_PROGRAM(R_bin_EXE_FILE exec/R ${PATH})
As regards 'error-traps'. Here are the two traps at the top of the
script:-
FIND_PROGRAM(R_bin_EXE_FILE exec/R ${PATH} )
IF(R_bin_EXE_FILE-NOTFOUND)
MESSAGE(STATUS "Could NOT find R ")
ENDIF(R_bin_EXE_FILE-NOTFOUND)
IF(NOT R_bin_EXE_FILE)
MESSAGE(STATUS "Could NOT find R ")
ENDIF(NOT R_bin_EXE_FILE)
I hope I ensured R is found correctly (at the bottom of the script) like
this:-
IF(R_HOME AND R_EXE_FILE AND R_bin_EXE_FILE AND R_SHARED_LIB AND
R_LIBS_REQ AND R_EXTRALIBS_REQ AND R_HEADER_FILE )
SET(R_FOUND TRUE )
MESSAGE(STATUS "Found R: ${R_HOME}: libs: ${R_LIBS_REQ} and
${R_EXTRALIBS_REQ}" )
ENDIF(R_HOME AND R_EXE_FILE AND R_bin_EXE_FILE AND R_SHARED_LIB AND
R_LIBS_REQ AND R_EXTRALIBS_REQ AND R_HEADER_FILE )
with the above included, a snippet from running cmake gives:-
#########
-- Building with gpsd position provider
-- Found Readline: /usr/lib64/libncurses.so
-- Found:/usr/local/R-2.10.1/lib64/R/bin/R
-- Found:/usr/local/R-2.10.1/lib64/R/bin/Rscript
-- Found:/usr/local/R-2.10.1/lib64/R/bin/exec/R
-- Found:/usr/local/R-2.10.1/lib64/R/include/R.h
-- Found:/usr/local/R-2.10.1/lib64/R/modules/R_X11.so
-- Found:/usr/local/R-2.10.1/lib64/R/modules/internet.so
-- Found:/usr/local/R-2.10.1/lib64/R/modules/vfonts.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/cluster/libs/cluster.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/foreign/libs/foreign.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/grDevices/libs/grDevices.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/grid/libs/grid.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/KernSmooth/libs/KernSmooth.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/lattice/libs/lattice.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/MASS/libs/MASS.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/Matrix/libs/Matrix.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/methods/libs/methods.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/mgcv/libs/mgcv.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/nlme/libs/nlme.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/nnet/libs/nnet.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/spatial/libs/spatial.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/splines/libs/splines.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/stats/libs/stats.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/survival/libs/survival.so
-- Found:/usr/local/R-2.10.1/lib64/R/library/tools/libs/tools.so
-- Found:/usr/lib64/libgfortran.a
-- Found:/usr/local/R-2.10.1/lib64/R/lib/libRlapack.so
-- Found:/usr/local/R-2.10.1/lib64/R/modules/lapack.so
-- Found:/usr/local/R-2.10.1/lib64/R/include/R_ext/Lapack.h
Yuw should be chuffed matey; R2 has been compiled wiv LAPAC
-- Found:/usr/local/R-2.10.1/lib64/R/lib/libRblas.so
-- Found:/usr/local/R-2.10.1/lib64/R/include/R_ext/BLAS.h
YIPPIEEEE; R2 has been compiled with BLAS
-- Found R: /usr/local/R-2.10.1/lib64/R:
libs: /usr/local/R-2.10.1/lib64/R/lib/libRblas.so
and /usr/local/R-2.10.1/lib64/R/library/tools/libs/tools.so
-- WARNING: you are using the obsolete 'PKGCONFIG' macro use FindPkgConfig
-- Found LibSpectre: -lspectre
-- Found Eigen2: /opt/kde-4.4.2/include/eigen2
-- Found OCaml: /usr/bin/ocamlc
#########
however 'make' still fails at 79%
Now as I said in my last posting there are two ~/bin directories for R:-
poet [ ~ ]$ ls /usr/local/R-2.10.1/bin
R Rscript
poet [ ~ ]$
poet [ ~ ]$
poet [ ~ ]$ ls /usr/local/R-2.10.1/lib64/R/bin
BATCH INSTALL R Rcmd Rdconv Rprof SHLIB Stangle build
config f77_f2c libtool pager
COMPILE LINK REMOVE Rd2dvi Rdiff Rscript Sd2Rd Sweave check exec
javareconf mkinstalldirs rtags
poet [ ~ ]$
poet [ ~ ]$
(exec is a directory containing the R binary ~7Mbytes in size)
If I am targeting the wrong R's ( or indeed the right ones) I would be
grateful if someone on list could let me know.
yours sincerely
lux-integ
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