[kalzium] [Bug 476409] New: Kalzium Crashes After Clicking Molecule Editor

nick bugzilla_noreply at kde.org
Wed Nov 1 12:05:46 GMT 2023


https://bugs.kde.org/show_bug.cgi?id=476409

            Bug ID: 476409
           Summary: Kalzium Crashes After Clicking Molecule Editor
    Classification: Applications
           Product: kalzium
           Version: 22.12.3
          Platform: Debian stable
                OS: Linux
            Status: REPORTED
          Keywords: drkonqi
          Severity: crash
          Priority: NOR
         Component: general
          Assignee: kalzium at kde.org
          Reporter: salo.pro86 at gmail.com
  Target Milestone: ---

Application: kalzium (22.12.3)

Qt Version: 5.15.8
Frameworks Version: 5.103.0
Operating System: Linux 6.1.0-13-amd64 x86_64
Windowing System: X11
Distribution: Debian GNU/Linux 12 (bookworm)
DrKonqi: 5.27.5 [CoredumpBackend]

-- Information about the crash:
When i click on the "Molecule Editor" button, the Kalzium application crashes

The crash can be reproduced every time.

-- Backtrace:
Application: Kalzium (kalzium), signal: Aborted

           PID: 101013 (kalzium)
           UID: 1000 (nick)
           GID: 1000 (nick)
        Signal: 6 (ABRT)
     Timestamp: Wed 2023-11-01 04:54:08 PDT (21s ago)
  Command Line: /usr/bin/kalzium
    Executable: /usr/bin/kalzium
 Control Group:
/user.slice/user-1000.slice/user at 1000.service/app.slice/app-\x2fusr\x2fbin\x2fkalzium-7af3a2bae58b439fa7499802bc743c46.scope
          Unit: user at 1000.service
     User Unit:
app-\x2fusr\x2fbin\x2fkalzium-7af3a2bae58b439fa7499802bc743c46.scope
         Slice: user-1000.slice
     Owner UID: 1000 (nick)
       Boot ID: 99813076a52e4f6cb9abf5fc2f92680a
    Machine ID: f4b7c67cfbce4b70b84a3f1ee0412c92
      Hostname: Pro
       Storage:
/var/lib/systemd/coredump/core.kalzium.1000.99813076a52e4f6cb9abf5fc2f92680a.101013.1698839648000000.zst
(present)
  Size on Disk: 8.2M
       Message: Process 101013 (kalzium) of user 1000 dumped core.

                Module libsystemd.so.0 from deb systemd-252.17-1~deb12u1.amd64
                Module libudev.so.1 from deb systemd-252.17-1~deb12u1.amd64
                Stack trace of thread 101013:
                #0  0x00007fde31ea9d3c n/a (libc.so.6 + 0x8ad3c)
                #1  0x00007fde31e5af32 raise (libc.so.6 + 0x3bf32)
                #2  0x00007fde309b583d _ZN6KCrash19defaultCrashHandlerEi
(libKF5Crash.so.5 + 0x583d)
                #3  0x00007fde31e5afd0 n/a (libc.so.6 + 0x3bfd0)
                #4  0x00007fde31ea9d3c n/a (libc.so.6 + 0x8ad3c)
                #5  0x00007fde31e5af32 raise (libc.so.6 + 0x3bf32)
                #6  0x00007fde31e45472 abort (libc.so.6 + 0x26472)
                #7  0x00007fde31e45395 n/a (libc.so.6 + 0x26395)
                #8  0x00007fde31e53e32 __assert_fail (libc.so.6 + 0x34e32)
                #9  0x00007fde33895a83
_ZN8Avogadro4Core12LayerManager10layerCountEv (libAvogadroCore.so.1 + 0x8da83)
                #10 0x00007fde3475f8fe n/a (libAvogadroQtPlugins.so.1 +
0x15f8fe)
                #11 0x00007fde322e8f7c n/a (libQt5Core.so.5 + 0x2e8f7c)
                #12 0x00007fde347627a3 n/a (libAvogadroQtPlugins.so.1 +
0x1627a3)
                #13 0x00007fde322e8f7c n/a (libQt5Core.so.5 + 0x2e8f7c)
                #14 0x00007fde33066891 _ZN9QComboBox19currentIndexChangedEi
(libQt5Widgets.so.5 + 0x266891)
                #15 0x00007fde33068052 n/a (libQt5Widgets.so.5 + 0x268052)
                #16 0x00007fde3306b8cb n/a (libQt5Widgets.so.5 + 0x26b8cb)
                #17 0x00007fde3306bc6f _ZN9QComboBox15setCurrentIndexEi
(libQt5Widgets.so.5 + 0x26bc6f)
                #18 0x00007fde322e8f7c n/a (libQt5Core.so.5 + 0x2e8f7c)
                #19 0x00007fde3224bd5e
_ZN18QAbstractItemModel12rowsInsertedERK11QModelIndexiiNS_14QPrivateSignalE
(libQt5Core.so.5 + 0x24bd5e)
                #20 0x00007fde3225445a _ZN18QAbstractItemModel13endInsertRowsEv
(libQt5Core.so.5 + 0x25445a)
                #21 0x00007fde32b2185e n/a (libQt5Gui.so.5 + 0x52185e)
                #22 0x00007fde3306fff7
_ZN9QComboBox10insertItemEiRK5QIconRK7QStringRK8QVariant (libQt5Widgets.so.5 +
0x26fff7)
                #23 0x00007fde34761be2 n/a (libAvogadroQtPlugins.so.1 +
0x161be2)
                #24 0x00007fde3491b4d3
_ZN8Avogadro8QtOpenGL8GLWidget11setMoleculeEPNS_5QtGui8MoleculeE
(libAvogadroQtOpenGL.so.1 + 0x74d3)
                #25 0x000055fc7ec8be19 _ZN15KalziumGLWidgetC2EP7QWidget
(kalzium + 0x94e19)
                #26 0x000055fc7ec89f0b n/a (kalzium + 0x92f0b)
                #27 0x000055fc7ec8804f n/a (kalzium + 0x9104f)
                #28 0x000055fc7ecd001c n/a (kalzium + 0xd901c)
                #29 0x00007fde322e8f4f n/a (libQt5Core.so.5 + 0x2e8f4f)
                #30 0x00007fde32f5c782 _ZN7QAction9triggeredEb
(libQt5Widgets.so.5 + 0x15c782)
                #31 0x00007fde32f5f3ab _ZN7QAction8activateENS_11ActionEventE
(libQt5Widgets.so.5 + 0x15f3ab)
                #32 0x00007fde33056e8a n/a (libQt5Widgets.so.5 + 0x256e8a)
                #33 0x00007fde33056fd7
_ZN15QAbstractButton17mouseReleaseEventEP11QMouseEvent (libQt5Widgets.so.5 +
0x256fd7)
                #34 0x00007fde3314faaa
_ZN11QToolButton17mouseReleaseEventEP11QMouseEvent (libQt5Widgets.so.5 +
0x34faaa)
                #35 0x00007fde32fa4db8 _ZN7QWidget5eventEP6QEvent
(libQt5Widgets.so.5 + 0x1a4db8)
                #36 0x00007fde32f62fae
_ZN19QApplicationPrivate13notify_helperEP7QObjectP6QEvent (libQt5Widgets.so.5 +
0x162fae)
                #37 0x00007fde32f6b552
_ZN12QApplication6notifyEP7QObjectP6QEvent (libQt5Widgets.so.5 + 0x16b552)
                #38 0x00007fde322b16f8
_ZN16QCoreApplication15notifyInternal2EP7QObjectP6QEvent (libQt5Core.so.5 +
0x2b16f8)
                #39 0x00007fde32f6965e
_ZN19QApplicationPrivate14sendMouseEventEP7QWidgetP11QMouseEventS1_S1_PS1_R8QPointerIS0_Ebb
(libQt5Widgets.so.5 + 0x16965e)
                #40 0x00007fde32fbdbd8 n/a (libQt5Widgets.so.5 + 0x1bdbd8)
                #41 0x00007fde32fc0f60 n/a (libQt5Widgets.so.5 + 0x1c0f60)
                #42 0x00007fde32f62fae
_ZN19QApplicationPrivate13notify_helperEP7QObjectP6QEvent (libQt5Widgets.so.5 +
0x162fae)
                #43 0x00007fde322b16f8
_ZN16QCoreApplication15notifyInternal2EP7QObjectP6QEvent (libQt5Core.so.5 +
0x2b16f8)
                #44 0x00007fde3273d3ed
_ZN22QGuiApplicationPrivate17processMouseEventEPN29QWindowSystemInterfacePrivate10MouseEventE
(libQt5Gui.so.5 + 0x13d3ed)
                #45 0x00007fde32711cac
_ZN22QWindowSystemInterface22sendWindowSystemEventsE6QFlagsIN10QEventLoop17ProcessEventsFlagEE
(libQt5Gui.so.5 + 0x111cac)
                #46 0x00007fde2b0fbeca n/a (libQt5XcbQpa.so.5 + 0x6deca)
                #47 0x00007fde2fd1e7a9 g_main_context_dispatch
(libglib-2.0.so.0 + 0x547a9)
                #48 0x00007fde2fd1ea38 n/a (libglib-2.0.so.0 + 0x54a38)
                #49 0x00007fde2fd1eacc g_main_context_iteration
(libglib-2.0.so.0 + 0x54acc)
                #50 0x00007fde32309836
_ZN20QEventDispatcherGlib13processEventsE6QFlagsIN10QEventLoop17ProcessEventsFlagEE
(libQt5Core.so.5 + 0x309836)
                #51 0x00007fde322b017b
_ZN10QEventLoop4execE6QFlagsINS_17ProcessEventsFlagEE (libQt5Core.so.5 +
0x2b017b)
                #52 0x00007fde322b82d6 _ZN16QCoreApplication4execEv
(libQt5Core.so.5 + 0x2b82d6)
                #53 0x000055fc7ec7b6ae n/a (kalzium + 0x846ae)
                #54 0x00007fde31e461ca n/a (libc.so.6 + 0x271ca)
                #55 0x00007fde31e46285 __libc_start_main (libc.so.6 + 0x27285)
                #56 0x000055fc7ec7b881 n/a (kalzium + 0x84881)

                Stack trace of thread 101019:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101025:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101024:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101014:
                #0  0x00007fde31f1b05f __poll (libc.so.6 + 0xfc05f)
                #1  0x00007fde2f170d12 n/a (libxcb.so.1 + 0xcd12)
                #2  0x00007fde2f17307a xcb_wait_for_event (libxcb.so.1 +
0xf07a)
                #3  0x00007fde2b0faf00 n/a (libQt5XcbQpa.so.5 + 0x6cf00)
                #4  0x00007fde320cbd43 n/a (libQt5Core.so.5 + 0xcbd43)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101016:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101021:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101017:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101022:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101020:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101018:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101023:
                #0  0x00007fde31ea4da6 n/a (libc.so.6 + 0x85da6)
                #1  0x00007fde31ea7468 pthread_cond_wait (libc.so.6 + 0x88468)
                #2  0x00007fde2250c059 n/a (iris_dri.so + 0x10c059)
                #3  0x00007fde224be17b n/a (iris_dri.so + 0xbe17b)
                #4  0x00007fde2250bf97 n/a (iris_dri.so + 0x10bf97)
                #5  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #6  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)

                Stack trace of thread 101015:
                #0  0x00007fde31f1b05f __poll (libc.so.6 + 0xfc05f)
                #1  0x00007fde2fd1e9ae n/a (libglib-2.0.so.0 + 0x549ae)
                #2  0x00007fde2fd1eacc g_main_context_iteration
(libglib-2.0.so.0 + 0x54acc)
                #3  0x00007fde32309836
_ZN20QEventDispatcherGlib13processEventsE6QFlagsIN10QEventLoop17ProcessEventsFlagEE
(libQt5Core.so.5 + 0x309836)
                #4  0x00007fde322b017b
_ZN10QEventLoop4execE6QFlagsINS_17ProcessEventsFlagEE (libQt5Core.so.5 +
0x2b017b)
                #5  0x00007fde320cab87 _ZN7QThread4execEv (libQt5Core.so.5 +
0xcab87)
                #6  0x00007fde30b6c487 n/a (libQt5DBus.so.5 + 0x17487)
                #7  0x00007fde320cbd43 n/a (libQt5Core.so.5 + 0xcbd43)
                #8  0x00007fde31ea8044 n/a (libc.so.6 + 0x89044)
                #9  0x00007fde31f2861c n/a (libc.so.6 + 0x10961c)
                ELF object binary architecture: AMD x86-64

[New LWP 101013]
[New LWP 101019]
[New LWP 101025]
[New LWP 101024]
[New LWP 101014]
[New LWP 101016]
[New LWP 101021]
[New LWP 101017]
[New LWP 101022]
[New LWP 101020]
[New LWP 101018]
[New LWP 101023]
[New LWP 101015]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1".
Core was generated by `/usr/bin/kalzium'.
Program terminated with signal SIGABRT, Aborted.
#0  0x00007fde31ea9d3c in ?? () from /lib/x86_64-linux-gnu/libc.so.6
[Current thread is 1 (Thread 0x7fde2b9c2ec0 (LWP 101013))]
[Current thread is 1 (Thread 0x7fde2b9c2ec0 (LWP 101013))]

Thread 13 (Thread 0x7fde2a1b86c0 (LWP 101015)):
#0  0x00007fde31f1b05f in poll () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde2fd1e9ae in ?? () from /lib/x86_64-linux-gnu/libglib-2.0.so.0
#2  0x00007fde2fd1eacc in g_main_context_iteration () from
/lib/x86_64-linux-gnu/libglib-2.0.so.0
#3  0x00007fde32309836 in
QEventDispatcherGlib::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) ()
from /lib/x86_64-linux-gnu/libQt5Core.so.5
#4  0x00007fde322b017b in
QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>) () from
/lib/x86_64-linux-gnu/libQt5Core.so.5
#5  0x00007fde320cab87 in QThread::exec() () from
/lib/x86_64-linux-gnu/libQt5Core.so.5
#6  0x00007fde30b6c487 in ?? () from /lib/x86_64-linux-gnu/libQt5DBus.so.5
#7  0x00007fde320cbd43 in ?? () from /lib/x86_64-linux-gnu/libQt5Core.so.5
#8  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#9  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 12 (Thread 0x7fde0e7fc6c0 (LWP 101023)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 11 (Thread 0x7fde20bff6c0 (LWP 101018)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 10 (Thread 0x7fde0ffff6c0 (LWP 101020)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 9 (Thread 0x7fde0effd6c0 (LWP 101022)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 8 (Thread 0x7fde289fe6c0 (LWP 101017)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 7 (Thread 0x7fde0f7fe6c0 (LWP 101021)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 6 (Thread 0x7fde291ff6c0 (LWP 101016)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 5 (Thread 0x7fde2adff6c0 (LWP 101014)):
#0  0x00007fde31f1b05f in poll () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde2f170d12 in ?? () from /lib/x86_64-linux-gnu/libxcb.so.1
#2  0x00007fde2f17307a in xcb_wait_for_event () from
/lib/x86_64-linux-gnu/libxcb.so.1
#3  0x00007fde2b0faf00 in ?? () from /lib/x86_64-linux-gnu/libQt5XcbQpa.so.5
#4  0x00007fde320cbd43 in ?? () from /lib/x86_64-linux-gnu/libQt5Core.so.5
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 4 (Thread 0x7fde0dffb6c0 (LWP 101024)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 3 (Thread 0x7fde0d7fa6c0 (LWP 101025)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 2 (Thread 0x7fde14dff6c0 (LWP 101019)):
#0  0x00007fde31ea4da6 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#1  0x00007fde31ea7468 in pthread_cond_wait () from
/lib/x86_64-linux-gnu/libc.so.6
#2  0x00007fde2250c059 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#3  0x00007fde224be17b in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#4  0x00007fde2250bf97 in ?? () from /usr/lib/x86_64-linux-gnu/dri/iris_dri.so
#5  0x00007fde31ea8044 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31f2861c in ?? () from /lib/x86_64-linux-gnu/libc.so.6

Thread 1 (Thread 0x7fde2b9c2ec0 (LWP 101013)):
[KCrash Handler]
#4  0x00007fde31ea9d3c in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#5  0x00007fde31e5af32 in raise () from /lib/x86_64-linux-gnu/libc.so.6
#6  0x00007fde31e45472 in abort () from /lib/x86_64-linux-gnu/libc.so.6
#7  0x00007fde31e45395 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#8  0x00007fde31e53e32 in __assert_fail () from /lib/x86_64-linux-gnu/libc.so.6
#9  0x00007fde33895a83 in Avogadro::Core::LayerManager::layerCount() () from
/lib/x86_64-linux-gnu/libAvogadroCore.so.1
#10 0x00007fde3475f8fe in ?? () from
/lib/x86_64-linux-gnu/libAvogadroQtPlugins.so.1
#11 0x00007fde322e8f7c in ?? () from /lib/x86_64-linux-gnu/libQt5Core.so.5
#12 0x00007fde347627a3 in ?? () from
/lib/x86_64-linux-gnu/libAvogadroQtPlugins.so.1
#13 0x00007fde322e8f7c in ?? () from /lib/x86_64-linux-gnu/libQt5Core.so.5
#14 0x00007fde33066891 in QComboBox::currentIndexChanged(int) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#15 0x00007fde33068052 in ?? () from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#16 0x00007fde3306b8cb in ?? () from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#17 0x00007fde3306bc6f in QComboBox::setCurrentIndex(int) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#18 0x00007fde322e8f7c in ?? () from /lib/x86_64-linux-gnu/libQt5Core.so.5
#19 0x00007fde3224bd5e in QAbstractItemModel::rowsInserted(QModelIndex const&,
int, int, QAbstractItemModel::QPrivateSignal) () from
/lib/x86_64-linux-gnu/libQt5Core.so.5
#20 0x00007fde3225445a in QAbstractItemModel::endInsertRows() () from
/lib/x86_64-linux-gnu/libQt5Core.so.5
#21 0x00007fde32b2185e in ?? () from /lib/x86_64-linux-gnu/libQt5Gui.so.5
#22 0x00007fde3306fff7 in QComboBox::insertItem(int, QIcon const&, QString
const&, QVariant const&) () from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#23 0x00007fde34761be2 in ?? () from
/lib/x86_64-linux-gnu/libAvogadroQtPlugins.so.1
#24 0x00007fde3491b4d3 in
Avogadro::QtOpenGL::GLWidget::setMolecule(Avogadro::QtGui::Molecule*) () from
/lib/x86_64-linux-gnu/libAvogadroQtOpenGL.so.1
#25 0x000055fc7ec8be19 in KalziumGLWidget::KalziumGLWidget(QWidget*) ()
#26 0x000055fc7ec89f0b in ?? ()
#27 0x000055fc7ec8804f in ?? ()
#28 0x000055fc7ecd001c in ?? ()
#29 0x00007fde322e8f4f in ?? () from /lib/x86_64-linux-gnu/libQt5Core.so.5
#30 0x00007fde32f5c782 in QAction::triggered(bool) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#31 0x00007fde32f5f3ab in QAction::activate(QAction::ActionEvent) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#32 0x00007fde33056e8a in ?? () from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#33 0x00007fde33056fd7 in QAbstractButton::mouseReleaseEvent(QMouseEvent*) ()
from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#34 0x00007fde3314faaa in QToolButton::mouseReleaseEvent(QMouseEvent*) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#35 0x00007fde32fa4db8 in QWidget::event(QEvent*) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#36 0x00007fde32f62fae in QApplicationPrivate::notify_helper(QObject*, QEvent*)
() from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#37 0x00007fde32f6b552 in QApplication::notify(QObject*, QEvent*) () from
/lib/x86_64-linux-gnu/libQt5Widgets.so.5
#38 0x00007fde322b16f8 in QCoreApplication::notifyInternal2(QObject*, QEvent*)
() from /lib/x86_64-linux-gnu/libQt5Core.so.5
#39 0x00007fde32f6965e in QApplicationPrivate::sendMouseEvent(QWidget*,
QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer<QWidget>&, bool, bool) ()
from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#40 0x00007fde32fbdbd8 in ?? () from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#41 0x00007fde32fc0f60 in ?? () from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#42 0x00007fde32f62fae in QApplicationPrivate::notify_helper(QObject*, QEvent*)
() from /lib/x86_64-linux-gnu/libQt5Widgets.so.5
#43 0x00007fde322b16f8 in QCoreApplication::notifyInternal2(QObject*, QEvent*)
() from /lib/x86_64-linux-gnu/libQt5Core.so.5
#44 0x00007fde3273d3ed in
QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*)
() from /lib/x86_64-linux-gnu/libQt5Gui.so.5
#45 0x00007fde32711cac in
QWindowSystemInterface::sendWindowSystemEvents(QFlags<QEventLoop::ProcessEventsFlag>)
() from /lib/x86_64-linux-gnu/libQt5Gui.so.5
#46 0x00007fde2b0fbeca in ?? () from /lib/x86_64-linux-gnu/libQt5XcbQpa.so.5
#47 0x00007fde2fd1e7a9 in g_main_context_dispatch () from
/lib/x86_64-linux-gnu/libglib-2.0.so.0
#48 0x00007fde2fd1ea38 in ?? () from /lib/x86_64-linux-gnu/libglib-2.0.so.0
#49 0x00007fde2fd1eacc in g_main_context_iteration () from
/lib/x86_64-linux-gnu/libglib-2.0.so.0
#50 0x00007fde32309836 in
QEventDispatcherGlib::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) ()
from /lib/x86_64-linux-gnu/libQt5Core.so.5
#51 0x00007fde322b017b in
QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>) () from
/lib/x86_64-linux-gnu/libQt5Core.so.5
#52 0x00007fde322b82d6 in QCoreApplication::exec() () from
/lib/x86_64-linux-gnu/libQt5Core.so.5
#53 0x000055fc7ec7b6ae in ?? ()
#54 0x00007fde31e461ca in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#55 0x00007fde31e46285 in __libc_start_main () from
/lib/x86_64-linux-gnu/libc.so.6
#56 0x000055fc7ec7b881 in ?? ()

The reporter indicates this bug may be a duplicate of or related to bug 464438,
bug 457191.

Reported using DrKonqi

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